STRINGSTRING
AFY20012.1 AFY20012.1 AFY20019.1 AFY20019.1 AFY20018.1 AFY20018.1 AFY20015.1 AFY20015.1 AFY20020.1 AFY20020.1 AFY20017.1 AFY20017.1 AFY20011.1 AFY20011.1 AFY20014.1 AFY20014.1 AFY20016.1 AFY20016.1 AFY19913.1 AFY19913.1 AFY19263.1 AFY19263.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20012.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AFY20019.1
Nonspecific acid phosphatase.
 
    0.863
AFY20018.1
Hypothetical protein.
 
     0.860
AFY20015.1
Alpha-2 type XI collagen.
 
    0.833
AFY20020.1
Sulfatase family protein; [P] COG3119 Arylsulfatase A and related enzymes.
 
     0.786
AFY20017.1
TPR repeat-containing protein; [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.782
AFY20011.1
Hypothetical protein; [S] COG5361 Uncharacterized conserved protein.
 
     0.778
AFY20014.1
Hypothetical protein; [R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.726
AFY20016.1
[R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
    0.711
AFY19913.1
Hypothetical protein.
 
     0.669
AFY19263.1
Sulfatase family protein; [P] COG3119 Arylsulfatase A and related enzymes.
 
     0.624
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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