STRINGSTRING
AFY20029.1 AFY20029.1 AFY21368.1 AFY21368.1 AFY18208.1 AFY18208.1 AFY19401.1 AFY19401.1 AFY19262.1 AFY19262.1 AFY17719.1 AFY17719.1 AFY18451.1 AFY18451.1 AFY19684.1 AFY19684.1 AFY22604.1 AFY22604.1 AFY17645.1 AFY17645.1 AFY19542.1 AFY19542.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20029.1[K] COG0583 Transcriptional regulator. (326 aa)    
Predicted Functional Partners:
AFY21368.1
Leucine-rich repeat-containing protein.
  
     0.764
AFY18208.1
Hypothetical protein.
  
     0.760
AFY19401.1
Hypothetical protein.
  
     0.749
AFY19262.1
Hypothetical protein.
  
     0.740
AFY17719.1
Leucine-rich repeat-containing protein.
  
     0.729
AFY18451.1
Hypothetical protein.
  
     0.715
AFY19684.1
Hypothetical protein.
  
     0.715
AFY22604.1
Hypothetical protein.
  
     0.712
AFY17645.1
Hypothetical protein.
  
     0.709
AFY19542.1
Fatty acid hydroxylase.
  
     0.709
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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