STRINGSTRING
AFY20075.1 AFY20075.1 AFY18494.1 AFY18494.1 AFY17975.1 AFY17975.1 mucB mucB gloB gloB algG algG AFY20077.1 AFY20077.1 AFY21352.1 AFY21352.1 rnhA rnhA algK algK algX algX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20075.1Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. (252 aa)    
Predicted Functional Partners:
AFY18494.1
NlpB/DapX lipoprotein.
  
     0.693
AFY17975.1
[S] COG3164 Predicted membrane protein.
  
     0.680
mucB
Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity.
  
     0.668
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.658
algG
Alginate biosynthesis protein AlgG.
  
     0.641
AFY20077.1
[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
   
 0.630
AFY21352.1
Arc-like DNA binding protein.
  
     0.627
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.618
algK
Alginate biosynthesis protein AlgK; [R] COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.618
algX
Alginate biosynthesis protein AlgX.
  
     0.594
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (20%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.