STRINGSTRING
pyrD1 pyrD1 gltD2 gltD2 hydA hydA AFY20121.1 AFY20121.1 AFY22300.1 AFY22300.1 gltD1 gltD1 upp upp codA codA AFY19532.1 AFY19532.1 benC benC AFY21530.1 AFY21530.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pyrD1[F] COG0167 Dihydroorotate dehydrogenase. (424 aa)    
Predicted Functional Partners:
gltD2
Glutamate synthase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 0.999
hydA
Dihydropyrimidinase; [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
 0.997
AFY20121.1
Allantoate amidohydrolase; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
 0.972
AFY22300.1
[F] COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
  
 
 0.960
gltD1
[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.959
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
   
 
 0.930
codA
[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases.
  
 
 0.923
AFY19532.1
[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases.
  
 
 0.923
benC
Benzoate 1,2-dioxygenase ferredoxin reductase subunit; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.901
AFY21530.1
Oxidoreductase; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.901
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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