STRINGSTRING
AFY20126.1 AFY20126.1 pyrD1 pyrD1 betI betI hydA hydA gltD2 gltD2 AFY20911.1 AFY20911.1 AFY20127.1 AFY20127.1 xdhC1 xdhC1 guaD guaD polB polB allA allA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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[Homology]
Score
AFY20126.1[K] COG1309 Transcriptional regulator. (206 aa)    
Predicted Functional Partners:
pyrD1
[F] COG0167 Dihydroorotate dehydrogenase.
 
   
 0.662
betI
Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
  
     0.593
hydA
Dihydropyrimidinase; [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
   
 0.580
gltD2
Glutamate synthase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
   
 0.549
AFY20911.1
[S] COG3748 Predicted membrane protein.
 
     0.487
AFY20127.1
Outer membrane porin.
       0.479
xdhC1
[O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
     0.461
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.441
polB
[L] COG0417 DNA polymerase elongation subunit (family B).
  
     0.434
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
  
     0.413
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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