STRINGSTRING
AFY20220.1 AFY20220.1 AFY20222.1 AFY20222.1 AFY21131.1 AFY21131.1 AFY22222.1 AFY22222.1 AFY21369.1 AFY21369.1 AFY22330.1 AFY22330.1 dapA2 dapA2 AFY20219.1 AFY20219.1 AFY19902.1 AFY19902.1 AFY19812.1 AFY19812.1 AFY20221.1 AFY20221.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AFY20220.1AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. (264 aa)    
Predicted Functional Partners:
AFY20222.1
[E] COG3938 Proline racemase; Belongs to the proline racemase family.
 
     0.731
AFY21131.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.667
AFY22222.1
[K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.642
AFY21369.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.623
AFY22330.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.616
dapA2
[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
     0.571
AFY20219.1
Endoribonuclease L-PSP family protein; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
       0.564
AFY19902.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.551
AFY19812.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.543
AFY20221.1
[E] COG0531 Amino acid transporters.
       0.540
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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