STRINGSTRING
AFY20239.1 AFY20239.1 AFY18188.1 AFY18188.1 AFY20886.1 AFY20886.1 AFY20236.1 AFY20236.1 AFY20238.1 AFY20238.1 AFY20235.1 AFY20235.1 AFY20237.1 AFY20237.1 AFY19716.1 AFY19716.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20239.1Metallophosphoesterase; [R] COG2129 Predicted phosphoesterases, related to the Icc protein. (255 aa)    
Predicted Functional Partners:
AFY18188.1
Hypothetical protein.
   
 
 0.520
AFY20886.1
Ankyrin; [R] COG0666 FOG: Ankyrin repeat.
   
 
 0.520
AFY20236.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
       0.458
AFY20238.1
Hypothetical protein.
       0.456
AFY20235.1
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
       0.449
AFY20237.1
[C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.445
AFY19716.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.426
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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