STRINGSTRING
AFY20286.1 AFY20286.1 ppk ppk ppa ppa AFY20287.1 AFY20287.1 AFY17676.1 AFY17676.1 ompW ompW AFY22216.1 AFY22216.1 AFY20000.1 AFY20000.1 ccoG ccoG hemN1 hemN1 ompF ompF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20286.1Hypothetical protein; [S] COG2326 Uncharacterized conserved protein. (272 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.959
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.916
AFY20287.1
[P] COG0659 Sulfate permease and related transporters (MFS superfamily).
       0.608
AFY17676.1
Hypothetical protein; [C] COG1032 Fe-S oxidoreductase.
   
    0.596
ompW
[M] COG3047 Outer membrane protein W.
   
    0.596
AFY22216.1
Hypothetical protein.
   
    0.595
AFY20000.1
Iron-sulfur cluster-binding protein; [C] COG0348 Polyferredoxin.
   
    0.482
ccoG
Cytochrome c oxidase accessory protein CcoG; [C] COG0348 Polyferredoxin.
   
    0.482
hemN1
[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.456
ompF
[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
   
    0.456
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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