STRINGSTRING
AFY20347.1 AFY20347.1 AFY20340.1 AFY20340.1 AFY20339.1 AFY20339.1 AFY20346.1 AFY20346.1 AFY20348.1 AFY20348.1 AFY20163.1 AFY20163.1 pvdD pvdD AFY20349.1 AFY20349.1 AFY20345.1 AFY20345.1 pvdI pvdI pvdJ pvdJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20347.1[GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase. (427 aa)    
Predicted Functional Partners:
AFY20340.1
Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily.
 
     0.823
AFY20339.1
Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily.
 
     0.814
AFY20346.1
[K] COG2186 Transcriptional regulators.
 
     0.734
AFY20348.1
FAD dependent oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.700
AFY20163.1
[Q] COG2124 Cytochrome P450.
  
 
 0.648
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.646
AFY20349.1
Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily.
 
     0.610
AFY20345.1
[E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
     0.603
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.535
pvdJ
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.515
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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