Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY19742.1 | AFY20353.1 | PputUW4_02547 | PputUW4_03158 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | 0.429 |
AFY19742.1 | AFY20390.1 | PputUW4_02547 | PputUW4_03195 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | Hypothetical protein. | 0.467 |
AFY20192.1 | AFY20353.1 | PputUW4_02997 | PputUW4_03158 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | 0.531 |
AFY20192.1 | AFY20355.1 | PputUW4_02997 | PputUW4_03160 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | FAD dependent oxidoreductase; [P] COG2072 Predicted flavoprotein involved in K+ transport. | 0.417 |
AFY20192.1 | AFY20390.1 | PputUW4_02997 | PputUW4_03195 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | Hypothetical protein. | 0.418 |
AFY20192.1 | AFY21937.1 | PputUW4_02997 | PputUW4_04747 | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.427 |
AFY20351.1 | AFY20353.1 | PputUW4_03156 | PputUW4_03158 | Binding protein component of ABC transporter; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | 0.711 |
AFY20351.1 | AFY20354.1 | PputUW4_03156 | PputUW4_03159 | Binding protein component of ABC transporter; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. | Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family. | 0.658 |
AFY20351.1 | AFY20355.1 | PputUW4_03156 | PputUW4_03160 | Binding protein component of ABC transporter; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. | FAD dependent oxidoreductase; [P] COG2072 Predicted flavoprotein involved in K+ transport. | 0.656 |
AFY20351.1 | argE1 | PputUW4_03156 | PputUW4_03157 | Binding protein component of ABC transporter; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. | [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. | 0.709 |
AFY20353.1 | AFY19742.1 | PputUW4_03158 | PputUW4_02547 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | 0.429 |
AFY20353.1 | AFY20192.1 | PputUW4_03158 | PputUW4_02997 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Hypothetical protein; [R] COG3450 Predicted enzyme of the cupin superfamily. | 0.531 |
AFY20353.1 | AFY20351.1 | PputUW4_03158 | PputUW4_03156 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Binding protein component of ABC transporter; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. | 0.711 |
AFY20353.1 | AFY20354.1 | PputUW4_03158 | PputUW4_03159 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family. | 0.952 |
AFY20353.1 | AFY20355.1 | PputUW4_03158 | PputUW4_03160 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | FAD dependent oxidoreductase; [P] COG2072 Predicted flavoprotein involved in K+ transport. | 0.953 |
AFY20353.1 | AFY20356.1 | PputUW4_03158 | PputUW4_03161 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Cystathionine beta-synthase; [E] COG0031 Cysteine synthase. | 0.440 |
AFY20353.1 | AFY20357.1 | PputUW4_03158 | PputUW4_03162 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.427 |
AFY20353.1 | AFY20390.1 | PputUW4_03158 | PputUW4_03195 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | Hypothetical protein. | 0.444 |
AFY20353.1 | AFY21937.1 | PputUW4_03158 | PputUW4_04747 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.761 |
AFY20353.1 | argE1 | PputUW4_03158 | PputUW4_03157 | Hypothetical protein; [S] COG3342 Uncharacterized conserved protein. | [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. | 0.861 |
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