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potD2 potD2 potI potI AFY20304.1 AFY20304.1 AFY20303.1 AFY20303.1 potH potH potA-3 potA-3 potG potG AFY20343.1 AFY20343.1 AFY19534.1 AFY19534.1 AFY20236.1 AFY20236.1 AFY20235.1 AFY20235.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
potD2[E] COG0687 Spermidine/putrescine-binding periplasmic protein. (366 aa)    
Predicted Functional Partners:
potI
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.972
AFY20304.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.971
AFY20303.1
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.968
potH
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.968
potA-3
Putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.955
potG
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.953
AFY20343.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 0.837
AFY19534.1
ABC transporter permease; [E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 0.822
AFY20236.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 0.818
AFY20235.1
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  
 0.738
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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