Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18494.1 | AFY20446.1 | PputUW4_01288 | PputUW4_03251 | NlpB/DapX lipoprotein. | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | 0.716 |
AFY18494.1 | comL | PputUW4_01288 | PputUW4_04654 | NlpB/DapX lipoprotein. | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.856 |
AFY18494.1 | yaeT | PputUW4_01288 | PputUW4_01096 | NlpB/DapX lipoprotein. | Outer membrane protein assembly complex,YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.895 |
AFY18494.1 | yfgL | PputUW4_01288 | PputUW4_00942 | NlpB/DapX lipoprotein. | Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.829 |
AFY20444.1 | AFY20445.1 | PputUW4_03249 | PputUW4_03250 | Hypothetical protein. | Hypothetical protein. | 0.436 |
AFY20444.1 | AFY20446.1 | PputUW4_03249 | PputUW4_03251 | Hypothetical protein. | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | 0.421 |
AFY20445.1 | AFY20444.1 | PputUW4_03250 | PputUW4_03249 | Hypothetical protein. | Hypothetical protein. | 0.436 |
AFY20445.1 | AFY20446.1 | PputUW4_03250 | PputUW4_03251 | Hypothetical protein. | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | 0.748 |
AFY20446.1 | AFY18494.1 | PputUW4_03251 | PputUW4_01288 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | NlpB/DapX lipoprotein. | 0.716 |
AFY20446.1 | AFY20444.1 | PputUW4_03251 | PputUW4_03249 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Hypothetical protein. | 0.421 |
AFY20446.1 | AFY20445.1 | PputUW4_03251 | PputUW4_03250 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Hypothetical protein. | 0.748 |
AFY20446.1 | comL | PputUW4_03251 | PputUW4_04654 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.687 |
AFY20446.1 | osmC | PputUW4_03251 | PputUW4_00089 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.435 |
AFY20446.1 | yaeT | PputUW4_03251 | PputUW4_01096 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Outer membrane protein assembly complex,YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.665 |
AFY20446.1 | yfgL | PputUW4_03251 | PputUW4_00942 | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.583 |
comL | AFY18494.1 | PputUW4_04654 | PputUW4_01288 | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | NlpB/DapX lipoprotein. | 0.856 |
comL | AFY20446.1 | PputUW4_04654 | PputUW4_03251 | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | 0.687 |
comL | yaeT | PputUW4_04654 | PputUW4_01096 | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane protein assembly complex,YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.937 |
comL | yfgL | PputUW4_04654 | PputUW4_00942 | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.901 |
osmC | AFY20446.1 | PputUW4_00089 | PputUW4_03251 | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | SmpA/OmlA domain-containing protein; [J] COG2913 Small protein A (tmRNA-binding). | 0.435 |
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