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benC benC xylL xylL benB benB benA benA fadH fadH AFY19957.1 AFY19957.1 catC catC nuoCD nuoCD catA catA gltD1 gltD1 gltD2 gltD2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
benCBenzoate 1,2-dioxygenase ferredoxin reductase subunit; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (337 aa)    
Predicted Functional Partners:
xylL
[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.999
benB
[Q] COG5517 Small subunit of phenylpropionate dioxygenase.
 
 
 0.998
benA
Benzoate 1,2-dioxygenase large subunit; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 
 0.996
fadH
[C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.937
AFY19957.1
NADH:flavin oxidoreductase/NADH oxidase; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.937
catC
[Q] COG4829 Muconolactone delta-isomerase.
 
  
 0.936
nuoCD
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.931
catA
Catechol 1,2-dioxygenase; [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.905
gltD1
[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.904
gltD2
Glutamate synthase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.904
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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