STRINGSTRING
catC catC catB catB catA catA pcaD1 pcaD1 AFY21173.1 AFY21173.1 benC benC benB benB pcaC1 pcaC1 AFY17964.1 AFY17964.1 AFY19465.1 AFY19465.1 pcaC2 pcaC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
catC[Q] COG4829 Muconolactone delta-isomerase. (96 aa)    
Predicted Functional Partners:
catB
Muconate cycloisomerase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.999
catA
Catechol 1,2-dioxygenase; [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.978
pcaD1
3-oxoadipate enol-lactonase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
 0.976
AFY21173.1
[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.943
benC
Benzoate 1,2-dioxygenase ferredoxin reductase subunit; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
  
 0.936
benB
[Q] COG5517 Small subunit of phenylpropionate dioxygenase.
 
  
 0.926
pcaC1
4-carboxymuconolactone decarboxylase; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
    
 0.918
AFY17964.1
4-carboxymuconolactone decarboxylase; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
    
 0.909
AFY19465.1
Hybrid protein containing carboxymuconolactone decarboxylase domain and Cupin 2 barrel domain; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
    
 0.909
pcaC2
[S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
    
 0.909
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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