STRINGSTRING
AFY20472.1 AFY20472.1 pldA pldA AFY20471.1 AFY20471.1 AFY18074.1 AFY18074.1 AFY17866.1 AFY17866.1 AFY17858.1 AFY17858.1 AFY19941.1 AFY19941.1 AFY20470.1 AFY20470.1 AFY21016.1 AFY21016.1 AFY18025.1 AFY18025.1 AFY19511.1 AFY19511.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20472.1Lipoprotein; [R] COG0790 FOG: TPR repeat, SEL1 subfamily. (346 aa)    
Predicted Functional Partners:
pldA
Phospholipase D/transphosphatidylase; [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
 
   
 0.843
AFY20471.1
Lipoprotein; [R] COG0790 FOG: TPR repeat, SEL1 subfamily.
 
    
0.726
AFY18074.1
Hypothetical protein.
  
    0.664
AFY17866.1
Hypothetical protein.
 
   
 0.650
AFY17858.1
ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class.
   
 0.581
AFY19941.1
Ribosyldihydronicotinamide dehydrogenase (quinone); [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).
  
    0.514
AFY20470.1
Hypothetical protein.
       0.510
AFY21016.1
[E] COG4413 Urea transporter.
  
     0.506
AFY18025.1
Alpha/beta hydrolase fold family protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 
 0.484
AFY19511.1
[S] COG1289 Predicted membrane protein.
  
     0.473
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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