Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18790.1 | AFY20497.1 | PputUW4_01585 | PputUW4_03302 | [R] COG1741 Pirin-related protein; Belongs to the pirin family. | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | 0.449 |
AFY20497.1 | AFY18790.1 | PputUW4_03302 | PputUW4_01585 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | [R] COG1741 Pirin-related protein; Belongs to the pirin family. | 0.449 |
AFY20497.1 | AFY20498.1 | PputUW4_03302 | PputUW4_03303 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | 0.835 |
AFY20497.1 | AFY20499.1 | PputUW4_03302 | PputUW4_03304 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | 0.603 |
AFY20497.1 | AFY20500.1 | PputUW4_03302 | PputUW4_03305 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | DoxX family protein; [S] COG2259 Predicted membrane protein. | 0.605 |
AFY20497.1 | AFY20501.1 | PputUW4_03302 | PputUW4_03306 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | Hypothetical protein. | 0.406 |
AFY20497.1 | AFY21831.1 | PputUW4_03302 | PputUW4_04639 | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein. | 0.425 |
AFY20498.1 | AFY20497.1 | PputUW4_03303 | PputUW4_03302 | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | 0.835 |
AFY20498.1 | AFY20499.1 | PputUW4_03303 | PputUW4_03304 | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | 0.791 |
AFY20498.1 | AFY20500.1 | PputUW4_03303 | PputUW4_03305 | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | DoxX family protein; [S] COG2259 Predicted membrane protein. | 0.819 |
AFY20498.1 | AFY20501.1 | PputUW4_03303 | PputUW4_03306 | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | Hypothetical protein. | 0.527 |
AFY20499.1 | AFY20497.1 | PputUW4_03304 | PputUW4_03302 | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | 0.603 |
AFY20499.1 | AFY20498.1 | PputUW4_03304 | PputUW4_03303 | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | 0.791 |
AFY20499.1 | AFY20500.1 | PputUW4_03304 | PputUW4_03305 | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | DoxX family protein; [S] COG2259 Predicted membrane protein. | 0.831 |
AFY20499.1 | AFY20501.1 | PputUW4_03304 | PputUW4_03306 | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.527 |
AFY20500.1 | AFY20497.1 | PputUW4_03305 | PputUW4_03302 | DoxX family protein; [S] COG2259 Predicted membrane protein. | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | 0.605 |
AFY20500.1 | AFY20498.1 | PputUW4_03305 | PputUW4_03303 | DoxX family protein; [S] COG2259 Predicted membrane protein. | Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. | 0.819 |
AFY20500.1 | AFY20499.1 | PputUW4_03305 | PputUW4_03304 | DoxX family protein; [S] COG2259 Predicted membrane protein. | Antibiotic biosynthesis monooxygenase; [S] COG3224 Uncharacterized protein conserved in bacteria. | 0.831 |
AFY20500.1 | AFY20501.1 | PputUW4_03305 | PputUW4_03306 | DoxX family protein; [S] COG2259 Predicted membrane protein. | Hypothetical protein. | 0.527 |
AFY20501.1 | AFY20497.1 | PputUW4_03306 | PputUW4_03302 | Hypothetical protein. | Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase. | 0.406 |
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