Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18518.1 | AFY18736.1 | PputUW4_01312 | PputUW4_01531 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein; [M] COG0438 Glycosyltransferase. | 0.756 |
AFY18518.1 | AFY18737.1 | PputUW4_01312 | PputUW4_01532 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein; [M] COG0438 Glycosyltransferase. | 0.766 |
AFY18518.1 | AFY19141.1 | PputUW4_01312 | PputUW4_01936 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.441 |
AFY18518.1 | AFY19180.1 | PputUW4_01312 | PputUW4_01976 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Polysaccharide biosynthesis protein; [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | 0.672 |
AFY18518.1 | AFY19186.1 | PputUW4_01312 | PputUW4_01982 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Lipopolysaccharide biosynthesis; [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.663 |
AFY18518.1 | AFY19262.1 | PputUW4_01312 | PputUW4_02059 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.763 |
AFY18518.1 | AFY19401.1 | PputUW4_01312 | PputUW4_02202 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.765 |
AFY18518.1 | AFY19542.1 | PputUW4_01312 | PputUW4_02343 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Fatty acid hydroxylase. | 0.615 |
AFY18518.1 | AFY19678.1 | PputUW4_01312 | PputUW4_02481 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.647 |
AFY18518.1 | AFY20507.1 | PputUW4_01312 | PputUW4_03312 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | Transcriptional regulator; [K] COG3710 DNA-binding winged-HTH domains. | 0.474 |
AFY18736.1 | AFY18518.1 | PputUW4_01531 | PputUW4_01312 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.756 |
AFY18736.1 | AFY18737.1 | PputUW4_01531 | PputUW4_01532 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Hypothetical protein; [M] COG0438 Glycosyltransferase. | 0.876 |
AFY18736.1 | AFY19180.1 | PputUW4_01531 | PputUW4_01976 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Polysaccharide biosynthesis protein; [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | 0.797 |
AFY18736.1 | AFY19186.1 | PputUW4_01531 | PputUW4_01982 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Lipopolysaccharide biosynthesis; [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.775 |
AFY18736.1 | AFY19262.1 | PputUW4_01531 | PputUW4_02059 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Hypothetical protein. | 0.851 |
AFY18736.1 | AFY19401.1 | PputUW4_01531 | PputUW4_02202 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Hypothetical protein. | 0.852 |
AFY18736.1 | AFY19542.1 | PputUW4_01531 | PputUW4_02343 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Fatty acid hydroxylase. | 0.753 |
AFY18736.1 | AFY19678.1 | PputUW4_01531 | PputUW4_02481 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Hypothetical protein. | 0.739 |
AFY18736.1 | AFY20507.1 | PputUW4_01531 | PputUW4_03312 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | Transcriptional regulator; [K] COG3710 DNA-binding winged-HTH domains. | 0.476 |
AFY18737.1 | AFY18518.1 | PputUW4_01532 | PputUW4_01312 | Hypothetical protein; [M] COG0438 Glycosyltransferase. | [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.766 |
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