STRINGSTRING
AFY20533.1 AFY20533.1 AFY20537.1 AFY20537.1 AFY18547.1 AFY18547.1 fadA fadA AFY18969.1 AFY18969.1 AFY18967.1 AFY18967.1 bkdB bkdB mmgC mmgC fadB fadB fadJ fadJ AFY20534.1 AFY20534.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY20533.1[I] COG1960 Acyl-CoA dehydrogenases. (387 aa)    
Predicted Functional Partners:
AFY20537.1
Hypothetical protein; [S] COG3777 Uncharacterized conserved protein.
 
  
 0.939
AFY18547.1
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 0.934
AFY18969.1
[I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.925
AFY18967.1
[I] COG0439 Biotin carboxylase.
  
 0.918
bkdB
Branched-chain alpha-keto acid dehydrogenase subunit E2; [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
   
 0.911
mmgC
[I] COG1960 Acyl-CoA dehydrogenases.
  
  
 
0.909
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.894
fadJ
3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.894
AFY20534.1
L-carnitine dehydratase/bile acid-inducible protein F; [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
 
 0.833
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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