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AFY20544.1 AFY20544.1 AFY20543.1 AFY20543.1 AFY20542.1 AFY20542.1 AFY20545.1 AFY20545.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFY20544.1[C] COG4313 Protein involved in meta-pathway of phenol degradation. (289 aa)    
Predicted Functional Partners:
AFY20543.1
Phenylacetaldoxime dehydratase.
 
     0.752
AFY20542.1
AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.571
AFY20545.1
Amidase; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family.
 
     0.509
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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