STRINGSTRING
citA3 citA3 AFY20573.1 AFY20573.1 citB citB rpmE rpmE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
citA3Citrate-proton symporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. (432 aa)    
Predicted Functional Partners:
AFY20573.1
[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
  
 0.659
citB
Citrate utilization protein B.
       0.639
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.406
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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