STRINGSTRING
AFY20612.1 AFY20612.1 AFY20614.1 AFY20614.1 AFY20613.1 AFY20613.1 AFY20611.1 AFY20611.1 petA petA AFY22335.1 AFY22335.1 petB petB ccoN1 ccoN1 ccoN2 ccoN2 ccoO1 ccoO1 ccoO2 ccoO2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20612.1[C] COG2010 Cytochrome c, mono- and diheme variants. (412 aa)    
Predicted Functional Partners:
AFY20614.1
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
  
 0.858
AFY20613.1
Ferredoxin; [C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
  
 0.849
AFY20611.1
[O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
     0.813
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.768
AFY22335.1
Glucose-methanol-choline oxidoreductase; [E] COG2303 Choline dehydrogenase and related flavoproteins.
  
 
 0.758
petB
Cytochrome b/b6-like protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.754
ccoN1
[O] COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.655
ccoN2
[O] COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.655
ccoO1
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.647
ccoO2
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.647
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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