STRINGSTRING
AFY20711.1 AFY20711.1 AFY22480.1 AFY22480.1 AFY17257.1 AFY17257.1 AFY21253.1 AFY21253.1 mucA mucA AFY20952.1 AFY20952.1 AFY21279.1 AFY21279.1 AFY21751.1 AFY21751.1 AFY21818.1 AFY21818.1 AFY22257.1 AFY22257.1 AFY18037.1 AFY18037.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20711.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
AFY22480.1
Hypothetical protein.
  
     0.772
AFY17257.1
Hypothetical protein.
  
     0.760
AFY21253.1
Hypothetical protein.
  
     0.758
mucA
Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity.
  
     0.753
AFY20952.1
Hypothetical protein.
  
     0.750
AFY21279.1
Hypothetical protein.
  
     0.726
AFY21751.1
Hypothetical protein.
  
     0.725
AFY21818.1
Hypothetical protein.
  
     0.718
AFY22257.1
ArsR family transcriptional regulator; [QR] COG0500 SAM-dependent methyltransferases.
  
     0.717
AFY18037.1
YebG family protein; [S] COG3141 Uncharacterized protein conserved in bacteria.
  
     0.715
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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