STRINGSTRING
fadA fadA fadB fadB fadJ fadJ AFY17427.1 AFY17427.1 fadE fadE AFY18975.1 AFY18975.1 mmgC mmgC AFY19270.1 AFY19270.1 AFY19277.1 AFY19277.1 AFY19490.1 AFY19490.1 AFY19662.1 AFY19662.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)    
Predicted Functional Partners:
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
fadJ
3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.989
AFY17427.1
[I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.970
fadE
[I] COG1960 Acyl-CoA dehydrogenases.
 
 0.946
AFY18975.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.936
mmgC
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.934
AFY19270.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.934
AFY19277.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.934
AFY19490.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.934
AFY19662.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.934
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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