STRINGSTRING
AFY20721.1 AFY20721.1 hisP hisP potA-2 potA-2 pvdD pvdD AFY17858.1 AFY17858.1 pvdI pvdI AFY18360.1 AFY18360.1 AFY17324.1 AFY17324.1 AFY21144.1 AFY21144.1 AFY20722.1 AFY20722.1 dnaK dnaK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Textmining
[Homology]
Score
AFY20721.1[V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (599 aa)    
Predicted Functional Partners:
hisP
Histidine transport ATP-binding protein HisP; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
     
0.809
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
0.705
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.680
AFY17858.1
ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class.
 
 
 0.631
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.615
AFY18360.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
     
0.591
AFY17324.1
Type I secretion system ATPase family protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 
0.568
AFY21144.1
Type I secretion system ATPase; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 
0.567
AFY20722.1
Hypothetical protein.
       0.554
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.513
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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