STRINGSTRING
AFY20771.1 AFY20771.1 AFY17480.1 AFY17480.1 astE astE AFY18528.1 AFY18528.1 AFY21795.1 AFY21795.1 AFY21796.1 AFY21796.1 AFY22245.1 AFY22245.1 AFY21794.1 AFY21794.1 AFY22270.1 AFY22270.1 dnaX dnaX AFY17645.1 AFY17645.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
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[Homology]
Score
AFY20771.1Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (265 aa)    
Predicted Functional Partners:
AFY17480.1
Hypothetical protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.654
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
    0.654
AFY18528.1
Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.638
AFY21795.1
Hypothetical protein.
  
     0.630
AFY21796.1
Hypothetical protein.
  
    0.627
AFY22245.1
[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.622
AFY21794.1
Hypothetical protein.
  
     0.621
AFY22270.1
Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.585
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.584
AFY17645.1
Hypothetical protein.
  
     0.578
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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