STRINGSTRING
AFY20859.1 AFY20859.1 AFY20908.1 AFY20908.1 AFY20858.1 AFY20858.1 AFY20665.1 AFY20665.1 AFY19332.1 AFY19332.1 AFY21889.1 AFY21889.1 AFY20907.1 AFY20907.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY20859.1[E] COG4126 Hydantoin racemase. (242 aa)    
Predicted Functional Partners:
AFY20908.1
[S] COG3195 Uncharacterized protein conserved in bacteria.
 
  
  0.920
AFY20858.1
Cytosine/purines, uracil, thiamine, allantoin permease; [FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases.
 
     0.892
AFY20665.1
[F] COG2233 Xanthine/uracil permeases.
 
     0.525
AFY19332.1
Polysaccharide deacetylase family protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
     0.412
AFY21889.1
[K] COG1802 Transcriptional regulators.
 
     0.409
AFY20907.1
Polysaccharide deacetylase family protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
     0.405
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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