STRINGSTRING
AFY20871.1 AFY20871.1 fadE fadE mmgC mmgC fadJ fadJ AFY18970.1 AFY18970.1 AFY19662.1 AFY19662.1 AFY21436.1 AFY21436.1 fadB fadB AFY20512.1 AFY20512.1 AFY18967.1 AFY18967.1 AFY18969.1 AFY18969.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AFY20871.1[I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (229 aa)    
Predicted Functional Partners:
fadE
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.950
mmgC
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.944
fadJ
3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.944
AFY18970.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.941
AFY19662.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
 0.941
AFY21436.1
[I] COG2030 Acyl dehydratase.
 
 0.941
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.940
AFY20512.1
[I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.936
AFY18967.1
[I] COG0439 Biotin carboxylase.
  
 0.928
AFY18969.1
[I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.927
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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