STRINGSTRING
AFY21139.1 AFY21139.1 AFY21140.1 AFY21140.1 AFY17321.1 AFY17321.1 AFY17324.1 AFY17324.1 AFY21144.1 AFY21144.1 AFY21143.1 AFY21143.1 AFY17323.1 AFY17323.1 AFY21145.1 AFY21145.1 AFY17325.1 AFY17325.1 AFY17322.1 AFY17322.1 AFY20933.1 AFY20933.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21139.1Hypothetical protein; [S] COG3672 Predicted periplasmic protein. (235 aa)    
Predicted Functional Partners:
AFY21140.1
Diguanylate cyclase/phosphodiesterase; [T] COG2200 FOG: EAL domain.
 
 
 0.955
AFY17321.1
GGDEF/EAL domain-containing protein; [T] COG2199 FOG: GGDEF domain; COG2200 FOG: EAL domain.
 
 
 0.837
AFY17324.1
Type I secretion system ATPase family protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.802
AFY21144.1
Type I secretion system ATPase; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.799
AFY21143.1
[MU] COG1538 Outer membrane protein.
 
   
 0.795
AFY17323.1
[MU] COG1538 Outer membrane protein.
 
   
 0.793
AFY21145.1
[M] COG0845 Membrane-fusion protein.
 
  
 0.780
AFY17325.1
[M] COG0845 Membrane-fusion protein.
 
  
 0.776
AFY17322.1
Hypothetical protein.
 
     0.750
AFY20933.1
EAL/GGDEF domain-containing protein; [T] COG2199 FOG: GGDEF domain; COG2200 FOG: EAL domain.
 
 
 
 0.499
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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