STRINGSTRING
AFY21152.1 AFY21152.1 speB3 speB3 AFY21153.1 AFY21153.1 AFY21151.1 AFY21151.1 pvdD pvdD AFY17866.1 AFY17866.1 AFY18074.1 AFY18074.1 pvdI pvdI speB2 speB2 speB1 speB1 AFY18025.1 AFY18025.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AFY21152.1Beta-lactamase-like protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (241 aa)    
Predicted Functional Partners:
speB3
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
 
   
 0.760
AFY21153.1
Hypothetical protein.
       0.616
AFY21151.1
[ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.609
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.605
AFY17866.1
Hypothetical protein.
  
     0.548
AFY18074.1
Hypothetical protein.
 
     0.543
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.533
speB2
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
 
   
 0.512
speB1
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
 
   
 0.470
AFY18025.1
Alpha/beta hydrolase fold family protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.440
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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