STRINGSTRING
AFY21157.1 AFY21157.1 AFY21156.1 AFY21156.1 AFY17302.1 AFY17302.1 psiF psiF yjbB yjbB AFY22260.1 AFY22260.1 AFY19992.1 AFY19992.1 hcp hcp AFY17346.1 AFY17346.1 tssJ tssJ AFY21155.1 AFY21155.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21157.1[GEPR] COG0477 Permeases of the major facilitator superfamily. (393 aa)    
Predicted Functional Partners:
AFY21156.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.648
AFY17302.1
Hypothetical protein.
  
     0.635
psiF
Phosphate starvation-inducible protein PsiF.
  
     0.550
yjbB
Sodium-dependent inorganic phosphate(Pi) transporter family protein; [P] COG1283 Na+/phosphate symporter.
  
     0.523
AFY22260.1
Hypothetical protein.
  
     0.478
AFY19992.1
Outer membrane autotransporter; [M] COG3468 Type V secretory pathway, adhesin AidA.
  
   
 0.439
hcp
Type VI secretion system effector, Hcp1 family; [S] COG3157 Hemolysin-coregulated protein (uncharacterized).
  
   
 0.423
AFY17346.1
Hypothetical protein.
  
     0.419
tssJ
Type VI secretion lipoprotein; [S] COG3521 Uncharacterized protein conserved in bacteria.
  
     0.410
AFY21155.1
Hypothetical protein.
       0.407
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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