Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17641.1 | AFY17645.1 | PputUW4_00433 | PputUW4_00437 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.754 |
AFY17641.1 | AFY17719.1 | PputUW4_00433 | PputUW4_00511 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Leucine-rich repeat-containing protein. | 0.727 |
AFY17641.1 | AFY18208.1 | PputUW4_00433 | PputUW4_01001 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.626 |
AFY17641.1 | AFY19738.1 | PputUW4_00433 | PputUW4_02543 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.733 |
AFY17641.1 | AFY20029.1 | PputUW4_00433 | PputUW4_02834 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | [K] COG0583 Transcriptional regulator. | 0.556 |
AFY17641.1 | AFY20483.1 | PputUW4_00433 | PputUW4_03288 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Fimbrial assembly protein. | 0.655 |
AFY17641.1 | AFY21161.1 | PputUW4_00433 | PputUW4_03969 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.620 |
AFY17641.1 | AFY21162.1 | PputUW4_00433 | PputUW4_03970 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Putative lipoprotein. | 0.464 |
AFY17641.1 | AFY21794.1 | PputUW4_00433 | PputUW4_04602 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.747 |
AFY17641.1 | AFY21796.1 | PputUW4_00433 | PputUW4_04604 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.740 |
AFY17645.1 | AFY17641.1 | PputUW4_00437 | PputUW4_00433 | Hypothetical protein. | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | 0.754 |
AFY17645.1 | AFY17719.1 | PputUW4_00437 | PputUW4_00511 | Hypothetical protein. | Leucine-rich repeat-containing protein. | 0.770 |
AFY17645.1 | AFY18208.1 | PputUW4_00437 | PputUW4_01001 | Hypothetical protein. | Hypothetical protein. | 0.755 |
AFY17645.1 | AFY19738.1 | PputUW4_00437 | PputUW4_02543 | Hypothetical protein. | UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.772 |
AFY17645.1 | AFY20029.1 | PputUW4_00437 | PputUW4_02834 | Hypothetical protein. | [K] COG0583 Transcriptional regulator. | 0.709 |
AFY17645.1 | AFY21161.1 | PputUW4_00437 | PputUW4_03969 | Hypothetical protein. | Hypothetical protein. | 0.647 |
AFY17645.1 | AFY21162.1 | PputUW4_00437 | PputUW4_03970 | Hypothetical protein. | Putative lipoprotein. | 0.633 |
AFY17645.1 | AFY21794.1 | PputUW4_00437 | PputUW4_04602 | Hypothetical protein. | Hypothetical protein. | 0.772 |
AFY17645.1 | AFY21796.1 | PputUW4_00437 | PputUW4_04604 | Hypothetical protein. | Hypothetical protein. | 0.771 |
AFY17719.1 | AFY17641.1 | PputUW4_00511 | PputUW4_00433 | Leucine-rich repeat-containing protein. | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | 0.727 |
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