STRINGSTRING
AFY21164.1 AFY21164.1 AFY20326.1 AFY20326.1 AFY20325.1 AFY20325.1 AFY20094.1 AFY20094.1 AFY20033.1 AFY20033.1 AFY21407.1 AFY21407.1 AFY21408.1 AFY21408.1 AFY19082.1 AFY19082.1 AFY21163.1 AFY21163.1 AFY18715.1 AFY18715.1 AFY20010.1 AFY20010.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21164.1[S] COG4312 Uncharacterized protein conserved in bacteria. (244 aa)    
Predicted Functional Partners:
AFY20326.1
Hypothetical protein.
 
     0.774
AFY20325.1
Hypothetical protein.
 
     0.773
AFY20094.1
3-demethylubiquinone-9 3-methyltransferase.
 
     0.661
AFY20033.1
Cupin domain protein; [S] COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
     0.570
AFY21407.1
[K] COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family.
 
    0.534
AFY21408.1
DGPF domain-containing protein; [S] COG3795 Uncharacterized protein conserved in bacteria.
 
    0.522
AFY19082.1
Hypothetical protein.
  
     0.509
AFY21163.1
Hypothetical protein.
       0.500
AFY18715.1
Glyoxalase/bleomycin resistance protein/dioxygenase; [S] COG2764 Uncharacterized protein conserved in bacteria.
 
     0.480
AFY20010.1
[S] COG3795 Uncharacterized protein conserved in bacteria.
 
    0.459
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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