Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY19254.1 | AFY21186.1 | PputUW4_02051 | PputUW4_03994 | [S] COG3333 Uncharacterized protein conserved in bacteria. | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | 0.407 |
| AFY19254.1 | AFY21189.1 | PputUW4_02051 | PputUW4_03997 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.879 |
| AFY19254.1 | AFY21191.1 | PputUW4_02051 | PputUW4_03999 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.913 |
| AFY21185.1 | AFY21186.1 | PputUW4_03993 | PputUW4_03994 | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | 0.642 |
| AFY21185.1 | AFY21187.1 | PputUW4_03993 | PputUW4_03995 | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Amidohydrolase; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. | 0.720 |
| AFY21185.1 | AFY21188.1 | PputUW4_03993 | PputUW4_03996 | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.425 |
| AFY21186.1 | AFY19254.1 | PputUW4_03994 | PputUW4_02051 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.407 |
| AFY21186.1 | AFY21185.1 | PputUW4_03994 | PputUW4_03993 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.642 |
| AFY21186.1 | AFY21187.1 | PputUW4_03994 | PputUW4_03995 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | Amidohydrolase; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. | 0.788 |
| AFY21186.1 | AFY21188.1 | PputUW4_03994 | PputUW4_03996 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.783 |
| AFY21186.1 | AFY21189.1 | PputUW4_03994 | PputUW4_03997 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.463 |
| AFY21186.1 | AFY21191.1 | PputUW4_03994 | PputUW4_03999 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.456 |
| AFY21186.1 | apaH | PputUW4_03994 | PputUW4_04940 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.430 |
| AFY21186.1 | ksgA | PputUW4_03994 | PputUW4_04938 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.445 |
| AFY21186.1 | pdxJ | PputUW4_03994 | PputUW4_00961 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.883 |
| AFY21186.1 | serC | PputUW4_03994 | PputUW4_01359 | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.582 |
| AFY21187.1 | AFY21185.1 | PputUW4_03995 | PputUW4_03993 | Amidohydrolase; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.720 |
| AFY21187.1 | AFY21186.1 | PputUW4_03995 | PputUW4_03994 | Amidohydrolase; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. | 4-hydroxythreonine-4-phosphate dehydrogenase; [H] COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family. | 0.788 |
| AFY21187.1 | AFY21188.1 | PputUW4_03995 | PputUW4_03996 | Amidohydrolase; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. | [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.852 |
| AFY21188.1 | AFY21185.1 | PputUW4_03996 | PputUW4_03993 | [GEPR] COG0477 Permeases of the major facilitator superfamily. | L-rhamnonate dehydratase; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.425 |
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