STRINGSTRING
AFY21194.1 AFY21194.1 AFY18503.1 AFY18503.1 AFY19697.1 AFY19697.1 cysK cysK AFY17631.1 AFY17631.1 oprB1 oprB1 AFY21193.1 AFY21193.1 prgK prgK AFY21196.1 AFY21196.1 oprB2 oprB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFY21194.1[O] COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases. (312 aa)    
Predicted Functional Partners:
AFY18503.1
Transmembrane sulfatase; [R] COG2194 Predicted membrane-associated, metal-dependent hydrolase.
     
 0.905
AFY19697.1
[O] COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases.
  
  
 
0.905
cysK
[E] COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.503
AFY17631.1
Lipoprotein.
  
     0.454
oprB1
Porin B; [M] COG3659 Carbohydrate-selective porin.
  
     0.432
AFY21193.1
Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.430
prgK
[U] COG4669 Type III secretory pathway, lipoprotein EscJ.
  
   
 0.426
AFY21196.1
Hypothetical protein.
       0.417
oprB2
[M] COG3659 Carbohydrate-selective porin.
  
     0.413
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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