Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18502.1 | AFY21199.1 | PputUW4_01296 | PputUW4_04007 | [E] COG0174 Glutamine synthetase. | [E] COG1984 Allophanate hydrolase subunit 2. | 0.806 |
AFY18502.1 | ggt1 | PputUW4_01296 | PputUW4_01850 | [E] COG0174 Glutamine synthetase. | [E] COG0405 Gamma-glutamyltransferase. | 0.811 |
AFY18502.1 | ggt2 | PputUW4_01296 | PputUW4_04590 | [E] COG0174 Glutamine synthetase. | [E] COG0405 Gamma-glutamyltransferase. | 0.811 |
AFY18502.1 | glnA1 | PputUW4_01296 | PputUW4_00285 | [E] COG0174 Glutamine synthetase. | [E] COG0174 Glutamine synthetase. | 0.691 |
AFY18502.1 | glnA2 | PputUW4_01296 | PputUW4_01890 | [E] COG0174 Glutamine synthetase. | [E] COG0174 Glutamine synthetase. | 0.694 |
AFY18502.1 | gshA | PputUW4_01296 | PputUW4_00201 | [E] COG0174 Glutamine synthetase. | Glutamate--cysteine ligase; [H] COG2918 Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.812 |
AFY18502.1 | putA | PputUW4_01296 | PputUW4_00387 | [E] COG0174 Glutamine synthetase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.938 |
AFY18502.1 | pxpA | PputUW4_01296 | PputUW4_04009 | [E] COG0174 Glutamine synthetase. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.805 |
AFY21199.1 | AFY18502.1 | PputUW4_04007 | PputUW4_01296 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG0174 Glutamine synthetase. | 0.806 |
AFY21199.1 | AFY21200.1 | PputUW4_04007 | PputUW4_04008 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG2049 Allophanate hydrolase subunit 1. | 0.999 |
AFY21199.1 | chaC | PputUW4_04007 | PputUW4_05246 | [E] COG1984 Allophanate hydrolase subunit 2. | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.902 |
AFY21199.1 | ggt1 | PputUW4_04007 | PputUW4_01850 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG0405 Gamma-glutamyltransferase. | 0.900 |
AFY21199.1 | ggt2 | PputUW4_04007 | PputUW4_04590 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG0405 Gamma-glutamyltransferase. | 0.900 |
AFY21199.1 | glnA1 | PputUW4_04007 | PputUW4_00285 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG0174 Glutamine synthetase. | 0.806 |
AFY21199.1 | glnA2 | PputUW4_04007 | PputUW4_01890 | [E] COG1984 Allophanate hydrolase subunit 2. | [E] COG0174 Glutamine synthetase. | 0.806 |
AFY21199.1 | gshA | PputUW4_04007 | PputUW4_00201 | [E] COG1984 Allophanate hydrolase subunit 2. | Glutamate--cysteine ligase; [H] COG2918 Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.900 |
AFY21199.1 | putA | PputUW4_04007 | PputUW4_00387 | [E] COG1984 Allophanate hydrolase subunit 2. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.828 |
AFY21199.1 | pxpA | PputUW4_04007 | PputUW4_04009 | [E] COG1984 Allophanate hydrolase subunit 2. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.999 |
AFY21200.1 | AFY21199.1 | PputUW4_04008 | PputUW4_04007 | [E] COG2049 Allophanate hydrolase subunit 1. | [E] COG1984 Allophanate hydrolase subunit 2. | 0.999 |
AFY21200.1 | pxpA | PputUW4_04008 | PputUW4_04009 | [E] COG2049 Allophanate hydrolase subunit 1. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.997 |
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