Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY20769.1 | AFY21207.1 | PputUW4_03577 | PputUW4_04015 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Oligopeptidase B; [E] COG1770 Protease II. | 0.478 |
| AFY20769.1 | clpP | PputUW4_03577 | PputUW4_01710 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.433 |
| AFY21204.1 | AFY21205.1 | PputUW4_04012 | PputUW4_04013 | Hypothetical protein. | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | 0.831 |
| AFY21204.1 | AFY21206.1 | PputUW4_04012 | PputUW4_04014 | Hypothetical protein. | Hypothetical protein. | 0.670 |
| AFY21204.1 | AFY21207.1 | PputUW4_04012 | PputUW4_04015 | Hypothetical protein. | Oligopeptidase B; [E] COG1770 Protease II. | 0.455 |
| AFY21205.1 | AFY21204.1 | PputUW4_04013 | PputUW4_04012 | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | Hypothetical protein. | 0.831 |
| AFY21205.1 | AFY21206.1 | PputUW4_04013 | PputUW4_04014 | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | Hypothetical protein. | 0.691 |
| AFY21205.1 | AFY21207.1 | PputUW4_04013 | PputUW4_04015 | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | Oligopeptidase B; [E] COG1770 Protease II. | 0.467 |
| AFY21206.1 | AFY21204.1 | PputUW4_04014 | PputUW4_04012 | Hypothetical protein. | Hypothetical protein. | 0.670 |
| AFY21206.1 | AFY21205.1 | PputUW4_04014 | PputUW4_04013 | Hypothetical protein. | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | 0.691 |
| AFY21206.1 | AFY21207.1 | PputUW4_04014 | PputUW4_04015 | Hypothetical protein. | Oligopeptidase B; [E] COG1770 Protease II. | 0.505 |
| AFY21207.1 | AFY20769.1 | PputUW4_04015 | PputUW4_03577 | Oligopeptidase B; [E] COG1770 Protease II. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.478 |
| AFY21207.1 | AFY21204.1 | PputUW4_04015 | PputUW4_04012 | Oligopeptidase B; [E] COG1770 Protease II. | Hypothetical protein. | 0.455 |
| AFY21207.1 | AFY21205.1 | PputUW4_04015 | PputUW4_04013 | Oligopeptidase B; [E] COG1770 Protease II. | Glutamine amidotransferase, class-II; [R] COG0121 Predicted glutamine amidotransferase. | 0.467 |
| AFY21207.1 | AFY21206.1 | PputUW4_04015 | PputUW4_04014 | Oligopeptidase B; [E] COG1770 Protease II. | Hypothetical protein. | 0.505 |
| AFY21207.1 | AFY21208.1 | PputUW4_04015 | PputUW4_04016 | Oligopeptidase B; [E] COG1770 Protease II. | Cyclic nucleotide-binding protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.521 |
| AFY21207.1 | clpP | PputUW4_04015 | PputUW4_01710 | Oligopeptidase B; [E] COG1770 Protease II. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.466 |
| AFY21207.1 | rlmL | PputUW4_04015 | PputUW4_03608 | Oligopeptidase B; [E] COG1770 Protease II. | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.409 |
| AFY21207.1 | rlpA2 | PputUW4_04015 | PputUW4_04780 | Oligopeptidase B; [E] COG1770 Protease II. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.406 |
| AFY21208.1 | AFY21207.1 | PputUW4_04016 | PputUW4_04015 | Cyclic nucleotide-binding protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Oligopeptidase B; [E] COG1770 Protease II. | 0.521 |
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