Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY21264.1 | AFY21265.1 | PputUW4_04072 | PputUW4_04073 | TadE Family Protein. | TadE Family Protein. | 0.954 |
AFY21264.1 | AFY21266.1 | PputUW4_04072 | PputUW4_04074 | TadE Family Protein. | Hypothetical protein. | 0.962 |
AFY21264.1 | AFY21268.1 | PputUW4_04072 | PputUW4_04076 | TadE Family Protein. | AAA ATPase; [O] COG0606 Predicted ATPase with chaperone activity. | 0.868 |
AFY21264.1 | cpaA | PputUW4_04072 | PputUW4_04077 | TadE Family Protein. | [OU] COG4960 Flp pilus assembly protein, protease CpaA. | 0.865 |
AFY21264.1 | cpaB | PputUW4_04072 | PputUW4_04075 | TadE Family Protein. | [U] COG3745 Flp pilus assembly protein CpaB. | 0.957 |
AFY21264.1 | cpaC | PputUW4_04072 | PputUW4_04065 | TadE Family Protein. | [U] COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. | 0.553 |
AFY21264.1 | cpaE | PputUW4_04072 | PputUW4_04071 | TadE Family Protein. | [U] COG4963 Flp pilus assembly protein, ATPase CpaE. | 0.977 |
AFY21264.1 | cpaF | PputUW4_04072 | PputUW4_04070 | TadE Family Protein. | [U] COG4962 Flp pilus assembly protein, ATPase CpaF. | 0.940 |
AFY21264.1 | tadB | PputUW4_04072 | PputUW4_04069 | TadE Family Protein. | [U] COG4965 Flp pilus assembly protein TadB. | 0.973 |
AFY21264.1 | tadC | PputUW4_04072 | PputUW4_04068 | TadE Family Protein. | [NU] COG2064 Flp pilus assembly protein TadC. | 0.898 |
AFY21265.1 | AFY21264.1 | PputUW4_04073 | PputUW4_04072 | TadE Family Protein. | TadE Family Protein. | 0.954 |
AFY21265.1 | AFY21266.1 | PputUW4_04073 | PputUW4_04074 | TadE Family Protein. | Hypothetical protein. | 0.962 |
AFY21265.1 | AFY21268.1 | PputUW4_04073 | PputUW4_04076 | TadE Family Protein. | AAA ATPase; [O] COG0606 Predicted ATPase with chaperone activity. | 0.874 |
AFY21265.1 | cpaA | PputUW4_04073 | PputUW4_04077 | TadE Family Protein. | [OU] COG4960 Flp pilus assembly protein, protease CpaA. | 0.895 |
AFY21265.1 | cpaB | PputUW4_04073 | PputUW4_04075 | TadE Family Protein. | [U] COG3745 Flp pilus assembly protein CpaB. | 0.962 |
AFY21265.1 | cpaC | PputUW4_04073 | PputUW4_04065 | TadE Family Protein. | [U] COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. | 0.645 |
AFY21265.1 | cpaE | PputUW4_04073 | PputUW4_04071 | TadE Family Protein. | [U] COG4963 Flp pilus assembly protein, ATPase CpaE. | 0.978 |
AFY21265.1 | cpaF | PputUW4_04073 | PputUW4_04070 | TadE Family Protein. | [U] COG4962 Flp pilus assembly protein, ATPase CpaF. | 0.958 |
AFY21265.1 | tadB | PputUW4_04073 | PputUW4_04069 | TadE Family Protein. | [U] COG4965 Flp pilus assembly protein TadB. | 0.977 |
AFY21265.1 | tadC | PputUW4_04073 | PputUW4_04068 | TadE Family Protein. | [NU] COG2064 Flp pilus assembly protein TadC. | 0.931 |
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