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cpaE cpaE tadB tadB cpaB cpaB tadC tadC AFY21265.1 AFY21265.1 cpaF cpaF AFY21264.1 AFY21264.1 AFY21266.1 AFY21266.1 AFY21268.1 AFY21268.1 cpaA cpaA cpaC cpaC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpaE[U] COG4963 Flp pilus assembly protein, ATPase CpaE. (406 aa)    
Predicted Functional Partners:
tadB
[U] COG4965 Flp pilus assembly protein TadB.
 
  
 0.992
cpaB
[U] COG3745 Flp pilus assembly protein CpaB.
 
  
 0.982
tadC
[NU] COG2064 Flp pilus assembly protein TadC.
 
  
 0.978
AFY21265.1
TadE Family Protein.
 
  
 0.978
cpaF
[U] COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.977
AFY21264.1
TadE Family Protein.
 
  
 0.977
AFY21266.1
Hypothetical protein.
 
  
 0.975
AFY21268.1
AAA ATPase; [O] COG0606 Predicted ATPase with chaperone activity.
 
    0.926
cpaA
[OU] COG4960 Flp pilus assembly protein, protease CpaA.
 
   
 0.908
cpaC
[U] COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.859
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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