Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18444.1 | AFY21274.1 | PputUW4_01237 | PputUW4_04082 | Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.440 |
AFY19735.1 | AFY21274.1 | PputUW4_02540 | PputUW4_04082 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.769 |
AFY20098.1 | AFY21274.1 | PputUW4_02903 | PputUW4_04082 | Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.473 |
AFY21273.1 | AFY21274.1 | PputUW4_04081 | PputUW4_04082 | Chemotaxis sensory transducer; [NT] COG0840 Methyl-accepting chemotaxis protein. | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.517 |
AFY21274.1 | AFY18444.1 | PputUW4_04082 | PputUW4_01237 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.440 |
AFY21274.1 | AFY19735.1 | PputUW4_04082 | PputUW4_02540 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.769 |
AFY21274.1 | AFY20098.1 | PputUW4_04082 | PputUW4_02903 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.473 |
AFY21274.1 | AFY21273.1 | PputUW4_04082 | PputUW4_04081 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | Chemotaxis sensory transducer; [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.517 |
AFY21274.1 | AFY21275.1 | PputUW4_04082 | PputUW4_04083 | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | Short chain dehydrogenase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.420 |
AFY21275.1 | AFY21274.1 | PputUW4_04083 | PputUW4_04082 | Short chain dehydrogenase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. | 0.420 |