Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17434.1 | AFY21295.1 | PputUW4_00226 | PputUW4_04103 | [R] COG1011 Predicted hydrolase (HAD superfamily). | [S] COG3122 Uncharacterized protein conserved in bacteria. | 0.632 |
AFY17434.1 | AFY22425.1 | PputUW4_00226 | PputUW4_05236 | [R] COG1011 Predicted hydrolase (HAD superfamily). | [S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family. | 0.432 |
AFY17434.1 | mazG | PputUW4_00226 | PputUW4_04104 | [R] COG1011 Predicted hydrolase (HAD superfamily). | Nucleoside triphosphate pyrophosphohydrolase; [R] COG1694 Predicted pyrophosphatase. | 0.900 |
AFY17533.1 | AFY18492.1 | PputUW4_00325 | PputUW4_01286 | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | [E] COG2716 Glycine cleavage system regulatory protein. | 0.588 |
AFY17533.1 | AFY21295.1 | PputUW4_00325 | PputUW4_04103 | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | [S] COG3122 Uncharacterized protein conserved in bacteria. | 0.509 |
AFY17533.1 | AFY21807.1 | PputUW4_00325 | PputUW4_04615 | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | Putative lipoprotein. | 0.415 |
AFY17533.1 | AFY22425.1 | PputUW4_00325 | PputUW4_05236 | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | [S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family. | 0.684 |
AFY17533.1 | zipA | PputUW4_00325 | PputUW4_03596 | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.678 |
AFY18492.1 | AFY17533.1 | PputUW4_01286 | PputUW4_00325 | [E] COG2716 Glycine cleavage system regulatory protein. | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | 0.588 |
AFY18492.1 | AFY21295.1 | PputUW4_01286 | PputUW4_04103 | [E] COG2716 Glycine cleavage system regulatory protein. | [S] COG3122 Uncharacterized protein conserved in bacteria. | 0.563 |
AFY18492.1 | AFY21807.1 | PputUW4_01286 | PputUW4_04615 | [E] COG2716 Glycine cleavage system regulatory protein. | Putative lipoprotein. | 0.608 |
AFY18492.1 | AFY22425.1 | PputUW4_01286 | PputUW4_05236 | [E] COG2716 Glycine cleavage system regulatory protein. | [S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family. | 0.642 |
AFY18492.1 | zipA | PputUW4_01286 | PputUW4_03596 | [E] COG2716 Glycine cleavage system regulatory protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.550 |
AFY20978.1 | AFY21295.1 | PputUW4_03786 | PputUW4_04103 | Hypothetical protein. | [S] COG3122 Uncharacterized protein conserved in bacteria. | 0.635 |
AFY20978.1 | AFY22425.1 | PputUW4_03786 | PputUW4_05236 | Hypothetical protein. | [S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family. | 0.744 |
AFY20978.1 | zipA | PputUW4_03786 | PputUW4_03596 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.700 |
AFY21295.1 | AFY17434.1 | PputUW4_04103 | PputUW4_00226 | [S] COG3122 Uncharacterized protein conserved in bacteria. | [R] COG1011 Predicted hydrolase (HAD superfamily). | 0.632 |
AFY21295.1 | AFY17533.1 | PputUW4_04103 | PputUW4_00325 | [S] COG3122 Uncharacterized protein conserved in bacteria. | Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria. | 0.509 |
AFY21295.1 | AFY18492.1 | PputUW4_04103 | PputUW4_01286 | [S] COG3122 Uncharacterized protein conserved in bacteria. | [E] COG2716 Glycine cleavage system regulatory protein. | 0.563 |
AFY21295.1 | AFY20978.1 | PputUW4_04103 | PputUW4_03786 | [S] COG3122 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.635 |
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