STRINGSTRING
AFY21295.1 AFY21295.1 mazG mazG AFY22425.1 AFY22425.1 AFY20978.1 AFY20978.1 AFY17434.1 AFY17434.1 AFY18492.1 AFY18492.1 relA relA AFY21807.1 AFY21807.1 AFY17533.1 AFY17533.1 mrcB mrcB zipA zipA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21295.1[S] COG3122 Uncharacterized protein conserved in bacteria. (180 aa)    
Predicted Functional Partners:
mazG
Nucleoside triphosphate pyrophosphohydrolase; [R] COG1694 Predicted pyrophosphatase.
       0.732
AFY22425.1
[S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family.
  
     0.723
AFY20978.1
Hypothetical protein.
  
     0.635
AFY17434.1
[R] COG1011 Predicted hydrolase (HAD superfamily).
  
     0.632
AFY18492.1
[E] COG2716 Glycine cleavage system regulatory protein.
  
     0.563
relA
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.522
AFY21807.1
Putative lipoprotein.
  
     0.511
AFY17533.1
Sterol-binding domain-containing protein; [S] COG3165 Uncharacterized protein conserved in bacteria.
 
     0.509
mrcB
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
  
     0.495
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.493
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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