STRINGSTRING
AFY21303.1 AFY21303.1 AFY21302.1 AFY21302.1 AFY19304.1 AFY19304.1 AFY18786.1 AFY18786.1 gacS gacS AFY19949.1 AFY19949.1 AFY19638.1 AFY19638.1 AFY19139.1 AFY19139.1 AFY21124.1 AFY21124.1 AFY17718.1 AFY17718.1 AFY19884.1 AFY19884.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21303.1Two component transcriptional regulator; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (239 aa)    
Predicted Functional Partners:
AFY21302.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 0.996
AFY19304.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.900
AFY18786.1
Hpt sensor hybrid histidine kinase; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.870
gacS
[T] COG0642 Signal transduction histidine kinase.
 
 
0.870
AFY19949.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.855
AFY19638.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.844
AFY19139.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 0.825
AFY21124.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.825
AFY17718.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.822
AFY19884.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.821
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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