STRINGSTRING
AFY21311.1 AFY21311.1 arsC3 arsC3 wrbA wrbA AFY21253.1 AFY21253.1 AFY21279.1 AFY21279.1 AFY17251.1 AFY17251.1 AFY20934.1 AFY20934.1 mucA mucA AFY18494.1 AFY18494.1 AFY20686.1 AFY20686.1 AFY17616.1 AFY17616.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21311.1[S] COG3308 Predicted membrane protein. (141 aa)    
Predicted Functional Partners:
arsC3
[P] COG1393 Arsenate reductase and related proteins, glutaredoxin family.
       0.807
wrbA
Flavodoxin/nitric oxide synthase; [R] COG0655 Multimeric flavodoxin WrbA; Belongs to the WrbA family.
       0.807
AFY21253.1
Hypothetical protein.
  
     0.760
AFY21279.1
Hypothetical protein.
  
    0.746
AFY17251.1
Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.742
AFY20934.1
Hypothetical protein.
  
     0.730
mucA
Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity.
  
     0.726
AFY18494.1
NlpB/DapX lipoprotein.
  
     0.723
AFY20686.1
[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.710
AFY17616.1
LmbE-like protein.
  
     0.679
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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