STRINGSTRING
AFY21409.1 AFY21409.1 AFY21408.1 AFY21408.1 AFY21407.1 AFY21407.1 AFY21410.1 AFY21410.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFY21409.1[S] COG4319 Ketosteroid isomerase homolog. (141 aa)    
Predicted Functional Partners:
AFY21408.1
DGPF domain-containing protein; [S] COG3795 Uncharacterized protein conserved in bacteria.
 
     0.802
AFY21407.1
[K] COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family.
 
     0.777
AFY21410.1
GCN5-related N-acetyltransferase; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.537
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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