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AFY21460.1 AFY21460.1 bfr2 bfr2 bfr1 bfr1 hemH hemH cyoE1 cyoE1 cyoE2 cyoE2 AFY21459.1 AFY21459.1 fecR4 fecR4 AFY21461.1 AFY21461.1 pvdS pvdS fecR2 fecR2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY21460.1[P] COG3230 Heme oxygenase. (202 aa)    
Predicted Functional Partners:
bfr2
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 0.918
bfr1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.905
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.901
cyoE1
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
cyoE2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
AFY21459.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.816
fecR4
Sigma factor regulatory protein FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.706
AFY21461.1
[S] COG2832 Uncharacterized protein conserved in bacteria.
 
     0.668
pvdS
[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.654
fecR2
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.558
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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