oprD3 protein (Pseudomonas sp. UW4) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

oprD3

Outer membrane protein D. (442 aa)

Predicted Functional Partners:

AFY17616.1

0.529

AFY17954.1

0.523

AFY21279.1

0.502

AFY21498.1

0.496

AFY20935.1

0.464

fusC

0.451

AFY20840.1

0.434

AFY21253.1

0.416

AFY19831.1

0.404

AFY20978.1

0.401

Your Current Organism:

Pseudomonas sp. UW4

NCBI taxonomy Id: 1207075
Other names: P. sp. UW4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFY17616.1	AFY17954.1	PputUW4_00408	PputUW4_00747	LmbE-like protein.	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	0.474
AFY17616.1	AFY20840.1	PputUW4_00408	PputUW4_03648	LmbE-like protein.	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	0.667
AFY17616.1	AFY20935.1	PputUW4_00408	PputUW4_03743	LmbE-like protein.	Hypothetical protein.	0.770
AFY17616.1	AFY20978.1	PputUW4_00408	PputUW4_03786	LmbE-like protein.	Hypothetical protein.	0.563
AFY17616.1	AFY21253.1	PputUW4_00408	PputUW4_04061	LmbE-like protein.	Hypothetical protein.	0.735
AFY17616.1	AFY21279.1	PputUW4_00408	PputUW4_04087	LmbE-like protein.	Hypothetical protein.	0.703
AFY17616.1	oprD3	PputUW4_00408	PputUW4_04307	LmbE-like protein.	Outer membrane protein D.	0.529
AFY17954.1	AFY17616.1	PputUW4_00747	PputUW4_00408	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	LmbE-like protein.	0.474
AFY17954.1	AFY20840.1	PputUW4_00747	PputUW4_03648	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	0.416
AFY17954.1	AFY20935.1	PputUW4_00747	PputUW4_03743	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	Hypothetical protein.	0.450
AFY17954.1	oprD3	PputUW4_00747	PputUW4_04307	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	Outer membrane protein D.	0.523
AFY19831.1	oprD3	PputUW4_02636	PputUW4_04307	Hypothetical protein.	Outer membrane protein D.	0.404
AFY20840.1	AFY17616.1	PputUW4_03648	PputUW4_00408	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	LmbE-like protein.	0.667
AFY20840.1	AFY17954.1	PputUW4_03648	PputUW4_00747	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.	0.416
AFY20840.1	AFY20935.1	PputUW4_03648	PputUW4_03743	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Hypothetical protein.	0.676
AFY20840.1	AFY20978.1	PputUW4_03648	PputUW4_03786	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Hypothetical protein.	0.448
AFY20840.1	AFY21253.1	PputUW4_03648	PputUW4_04061	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Hypothetical protein.	0.417
AFY20840.1	AFY21279.1	PputUW4_03648	PputUW4_04087	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Hypothetical protein.	0.421
AFY20840.1	oprD3	PputUW4_03648	PputUW4_04307	TM helix repeat-containing protein; [M] COG0668 Small-conductance mechanosensitive channel.	Outer membrane protein D.	0.434
AFY20935.1	AFY17616.1	PputUW4_03743	PputUW4_00408	Hypothetical protein.	LmbE-like protein.	0.770