STRINGSTRING
AFY21514.1 AFY21514.1 AFY21513.1 AFY21513.1 AFY21512.1 AFY21512.1 AFY17773.1 AFY17773.1 AFY21509.1 AFY21509.1 AFY21517.1 AFY21517.1 AFY19618.1 AFY19618.1 scrY scrY AFY22247.1 AFY22247.1 AFY17284.1 AFY17284.1 AFY22195.1 AFY22195.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21514.1Hypothetical protein; [S] COG0392 Predicted integral membrane protein. (331 aa)    
Predicted Functional Partners:
AFY21513.1
Hypothetical protein; [R] COG3233 Predicted deacetylase.
 
    0.956
AFY21512.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
  
 0.938
AFY17773.1
Hypothetical protein.
  
     0.733
AFY21509.1
Hypothetical protein.
  
     0.661
AFY21517.1
DNA binding protein MvaT, H-NS family.
  
     0.656
AFY19618.1
Transcriptional regulator.
  
     0.649
scrY
[G] COG4580 Maltoporin (phage lambda and maltose receptor).
  
     0.583
AFY22247.1
[S] COG4519 Uncharacterized protein conserved in bacteria.
  
     0.583
AFY17284.1
Endonuclease/exonuclease/phosphatase family protein; [R] COG3568 Metal-dependent hydrolase.
 
  
 0.561
AFY22195.1
Hypothetical protein.
  
     0.516
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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