STRINGSTRING
AFY21531.1 AFY21531.1 gacS gacS AFY18786.1 AFY18786.1 AFY19949.1 AFY19949.1 AFY19619.1 AFY19619.1 AFY21530.1 AFY21530.1 AFY18655.1 AFY18655.1 AFY21617.1 AFY21617.1 AFY19538.1 AFY19538.1 AFY17321.1 AFY17321.1 AFY19748.1 AFY19748.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21531.1Diguanylate cyclase; [T] COG2199 FOG: GGDEF domain. (368 aa)    
Predicted Functional Partners:
gacS
[T] COG0642 Signal transduction histidine kinase.
 
 0.915
AFY18786.1
Hpt sensor hybrid histidine kinase; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.912
AFY19949.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.893
AFY19619.1
Diguanylate phosphodiesterase; [T] COG2200 FOG: EAL domain.
 
 
 0.808
AFY21530.1
Oxidoreductase; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
       0.807
AFY18655.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.800
AFY21617.1
Sensory box histidine kinase/response regulator; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.799
AFY19538.1
PAS/PAC sensor hybrid histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.793
AFY17321.1
GGDEF/EAL domain-containing protein; [T] COG2199 FOG: GGDEF domain; COG2200 FOG: EAL domain.
 
 
 0.790
AFY19748.1
PAS/PAC sensor hybrid histidine kinase; [T] COG2202 FOG: PAS/PAC domain.
 
 0.786
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (20%) [HD]