STRINGSTRING
AFY21535.1 AFY21535.1 AFY21534.1 AFY21534.1 AFY17440.1 AFY17440.1 AFY17439.1 AFY17439.1 rpoN rpoN AFY22249.1 AFY22249.1 AFY18226.1 AFY18226.1 ntrB ntrB AFY17778.1 AFY17778.1 wspE wspE pilL pilL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY21535.1[T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (441 aa)    
Predicted Functional Partners:
AFY21534.1
Sensor histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 0.993
AFY17440.1
Histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 0.966
AFY17439.1
[T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
  
  
 
0.904
rpoN
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.777
AFY22249.1
Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain.
  
 
0.672
AFY18226.1
[T] COG0642 Signal transduction histidine kinase.
 
 0.666
ntrB
[T] COG3852 Signal transduction histidine kinase, nitrogen specific.
 
 0.594
AFY17778.1
PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain.
 
 
 
 0.562
wspE
Sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.552
pilL
Type IV pili sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
0.552
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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