STRINGSTRING
AFY21551.1 AFY21551.1 AFY17447.1 AFY17447.1 pvdD pvdD AFY21552.1 AFY21552.1 pvdI pvdI soxA soxA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21551.1Beta-lactamase-like protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (292 aa)    
Predicted Functional Partners:
AFY17447.1
[O] COG3531 Predicted protein-disulfide isomerase.
 
    0.611
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.604
AFY21552.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.569
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.532
soxA
Sarcosine oxidase, alpha subunit; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.406
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.