Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17332.1 | AFY21556.1 | PputUW4_00124 | PputUW4_04364 | Multidrug efflux MFS membrane fusion protein; [V] COG1566 Multidrug resistance efflux pump. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.552 |
AFY19099.1 | AFY21556.1 | PputUW4_01894 | PputUW4_04364 | [V] COG1566 Multidrug resistance efflux pump. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.533 |
AFY21554.1 | AFY21556.1 | PputUW4_04362 | PputUW4_04364 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.405 |
AFY21554.1 | pobA | PputUW4_04362 | PputUW4_04363 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.810 |
AFY21556.1 | AFY17332.1 | PputUW4_04364 | PputUW4_00124 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Multidrug efflux MFS membrane fusion protein; [V] COG1566 Multidrug resistance efflux pump. | 0.552 |
AFY21556.1 | AFY19099.1 | PputUW4_04364 | PputUW4_01894 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | [V] COG1566 Multidrug resistance efflux pump. | 0.533 |
AFY21556.1 | AFY21554.1 | PputUW4_04364 | PputUW4_04362 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.405 |
AFY21556.1 | emrA1 | PputUW4_04364 | PputUW4_01592 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Multidrug resistance protein (HlyD family), EmrA-like secretion; [V] COG1566 Multidrug resistance efflux pump. | 0.540 |
AFY21556.1 | emrA2 | PputUW4_04364 | PputUW4_03466 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | [V] COG1566 Multidrug resistance efflux pump. | 0.538 |
AFY21556.1 | pobA | PputUW4_04364 | PputUW4_04363 | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.583 |
emrA1 | AFY21556.1 | PputUW4_01592 | PputUW4_04364 | Multidrug resistance protein (HlyD family), EmrA-like secretion; [V] COG1566 Multidrug resistance efflux pump. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.540 |
emrA2 | AFY21556.1 | PputUW4_03466 | PputUW4_04364 | [V] COG1566 Multidrug resistance efflux pump. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.538 |
pobA | AFY21554.1 | PputUW4_04363 | PputUW4_04362 | 4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.810 |
pobA | AFY21556.1 | PputUW4_04363 | PputUW4_04364 | 4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.583 |