STRINGSTRING
AFY21573.1 AFY21573.1 AFY21574.1 AFY21574.1 nuoCD nuoCD AFY21572.1 AFY21572.1 rfaP rfaP colS colS rfaG rfaG ppkB ppkB AFY17611.1 AFY17611.1 AFY18504.1 AFY18504.1 AFY22369.1 AFY22369.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY21573.1Lipopolysaccharide kinase. (237 aa)    
Predicted Functional Partners:
AFY21574.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
 
  
 0.949
nuoCD
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.874
AFY21572.1
Hypothetical protein.
     
 0.827
rfaP
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.810
colS
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.808
rfaG
Lipopolysaccharide core biosynthesis protein; [M] COG0438 Glycosyltransferase.
 
 
 0.803
ppkB
[RTKL] COG0515 Serine/threonine protein kinase.
 
 
 0.800
AFY17611.1
[RTKL] COG0515 Serine/threonine protein kinase.
 
   
 0.789
AFY18504.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
 
  
 0.786
AFY22369.1
SdiA-regulated domain protein; [S] COG3204 Uncharacterized protein conserved in bacteria.
 
   
 0.778
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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